Information for 1-AGATAAGR (Motif 1)


Reverse Opposite:

p-value:1e-494
log p-value:-1.138e+03
Information Content per bp:1.686
Number of Target Sequences with motif2306.0
Percentage of Target Sequences with motif76.87%
Number of Background Sequences with motif378.6
Percentage of Background Sequences with motif15.04%
Average Position of motif in Targets37.9 +/- 19.0bp
Average Position of motif in Background38.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:AGATAAGR
AGATAASR

GATA5/MA0766.1/Jaspar

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:AGATAAGR
AGATAAGA

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:3
Score:0.98
Offset:-2
Orientation:forward strand
Alignment:--AGATAAGR
NBWGATAAGR

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-AGATAAGR-
NAGATAAGNN

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:AGATAAGR
AGATAAGA

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-AGATAAGR-
CAGATAAGGN

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---AGATAAGR
NNGAGATAAGA

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGATAAGR
AGATAAG-

GAT1(MacIsaac)/Yeast

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGATAAGR
AGATAAG-

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--AGATAAGR-
ANAGATAAGAA