Information for 13-GRAACCTGCA (Motif 13)


Reverse Opposite:

p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.568
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets42.9 +/- 19.5bp
Average Position of motif in Background23.7 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/MA0385.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GRAACCTGCA----
---ACCTGCAGGCA

PHD1/MA0355.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GRAACCTGCA---
---ACCTGCAGCA

ARR1/MA0274.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GRAACCTGCA-
---ACTTGAAT

ARR1(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GRAACCTGCA-
---ACTTGAAT

sna/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GRAACCTGCA
-CCACCTGC-

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GRAACCTGCA
--TNCCTGCA

POL002.1_INR/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GRAACCTGCA
-NNNANTGA-

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GRAACCTGCA---
GAAAAAATTGCAAGG

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GRAACCTGCA
-NCACCTGTN

sna/MA0086.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GRAACCTGCA
--CACCTG--