Information for 6-TGCAGAGGAGGA (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.725
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.4 +/- 19.1bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCAGAGGAGGA---
-----GGGAGGACNG

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGAGGAGGA
NNNANTGCAGTGCNNTT

RME1/MA0370.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCAGAGGAGGA
TCCAAAGGAA--

PHD1/MA0355.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGAGGAGGA
NGNTGCAGGN-----

RME1(MacIsaac)/Yeast

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCAGAGGAGGA
TCCAAAGGAA--

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCAGAGGAGGA--
GAGCACAGCAGGACA

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCAGAGGAGGA
---AGAGGAA--

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCAGAGGAGGA----
TGCGGAGTGGGACTGG

SOK2/MA0385.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCAGAGGAGGA
ACCTGCAGGCA----

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCAGAGGAGGA
TGCAGGNA----