Information for 18-CAGAGTTTCT (Motif 16)


Reverse Opposite:

p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.825
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets29.1 +/- 16.9bp
Average Position of motif in Background41.9 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MET31/Literature(Harbison)/Yeast

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTTTCT
CCACAGTTT--

MET32/Literature(Harbison)/Yeast

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTTTCT
CCACAGTTT--

SUT2/MA0400.1/Jaspar

Match Rank:3
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------CAGAGTTTCT---
NNNNNTTCGGAGTTTNNNNN

HAC1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGAGTTTCT
GGACAGCGTGTC-

YLR278C/MA0430.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGAGTTTCT
CCGGAGTT---

MET4(MacIsaac)/Yeast

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTTTCT
CCACAGTT---

THI2/THI2_Thi-/[](Harbison)/Yeast

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGTTTCT
TCTTAGGGTTTC-

MET32(MacIsaac)/Yeast

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGTTTCT
GCCACAGTTT--

MET4/MA0335.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTTTCT
CCACAGTT---

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGAGTTTCT-
TATTGTTTATT