Information for 9-GGGGGGGGGAGG (Motif 20)


Reverse Opposite:

p-value:1e-2
log p-value:-6.161e+00
Information Content per bp:1.758
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets36.6 +/- 19.1bp
Average Position of motif in Background48.7 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGGGGGGGGAGG---
GGGGGGGGGGGGGGA

SeqBias: polyC-repeat

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGGGGGGGGAGG
--GGGGGGGGGG

PB0100.1_Zfp740_1/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GGGGGGGGGAGG
NANNTGGGGGGGGNGN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGGGGGGGGAGG
-GGGGGGGG---

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGGGGGGGAGG---
GGGNGGGGGCGGGGC

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGGGGGGGGAGG
GGGGNGGGGC--

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------GGGGGGGGGAGG-
SMCAGTCWGAKGGAGGAGGC

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGGGGGGGGAGG---
----GGGGGCGGGGC

ZNF740/MA0753.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGGGGGGGAGG-
---GTGGGGGGGG

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGGGGGGGAGG---
-GGCGGGGGCGGGGG