Information for 8-GAGGACGT (Motif 4)


Reverse Opposite:

p-value:1e-16
log p-value:-3.874e+01
Information Content per bp:1.839
Number of Target Sequences with motif197.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif50.8
Percentage of Background Sequences with motif2.02%
Average Position of motif in Targets34.3 +/- 19.0bp
Average Position of motif in Background39.8 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGT-
AGAGGAAGTG

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGT-
ACAGGAAGTG

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GAGGACGT
ACVAGGAAGT

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGT---
ACAGGATGTGGT

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GAGGACGT--
TTAAGAGGAAGTTA

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GAGGACGT
AACAGGAAGT

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAGGACGT
AVCAGGAAGT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGT-
ACAGGAAGTG

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAGGACGT-
AGCGGAAGTG

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACGT--
NDCAGGAARTNN