Information for 7-ATGACTCATN (Motif 5)


Reverse Opposite:

p-value:1e-14
log p-value:-3.241e+01
Information Content per bp:1.690
Number of Target Sequences with motif128.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets36.1 +/- 19.2bp
Average Position of motif in Background37.3 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-ATGACTCATN
DATGASTCAT-

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ATGACTCATN
ATGACTCATC

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:3
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-ATGACTCATN-
DATGASTCATHN

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-ATGACTCATN-
NATGACTCATNN

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:5
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTCATN-
DATGASTCATNN

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--ATGACTCATN
NNVTGASTCATN

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:7
Score:0.97
Offset:1
Orientation:forward strand
Alignment:ATGACTCATN
-TGACTCA--

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--ATGACTCATN
GGATGACTCAT-

GCN4(MacIsaac)/Yeast

Match Rank:9
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ATGACTCATN
ATGACTCA--

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--ATGACTCATN
GGATGACTCAT-