Information for 9-GTGGTTAC (Motif 6)


Reverse Opposite:

p-value:1e-14
log p-value:-3.232e+01
Information Content per bp:1.807
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets34.9 +/- 19.0bp
Average Position of motif in Background46.8 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTAC
CTGTGGTTTN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTAC
GCTGTGGTTT-

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTAC
NNTGTGGTTT-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTAC
NNHTGTGGTTWN

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTAC
GTCTGTGGTTT-

GT-1/MA1020.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTGGTTAC-
-TGGTTAAC

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGGTTAC
GTGGAT--

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTAC
TTGCGGTTT-

FKH2/MA0297.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GTGGTTAC
-TGTTTAC

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTGGTTAC
-TGTTTAC