Information for 1-CCTTATCT (Motif 1)


Reverse Opposite:

p-value:1e-94
log p-value:-2.173e+02
Information Content per bp:1.861
Number of Target Sequences with motif340.0
Percentage of Target Sequences with motif70.25%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif5.46%
Average Position of motif in Targets36.8 +/- 20.9bp
Average Position of motif in Background44.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.2/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:CCTTATCT
TCTTATCT

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-CCTTATCT--
TTCTTATCTGT

Gata4/MA0482.1/Jaspar

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CCTTATCT---
TCTTATCTCCC

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CCTTATCT-
NNCTTATCTN

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CCTTATCT
-CTTATCT

GAT1(MacIsaac)/Yeast

Match Rank:6
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CCTTATCT
-CTTATCT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CCTTATCT-
NCCTTATCTG

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CCTTATCT
YSTTATCT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:CCTTATCT--
YCTTATCWVN

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CCTTATCT
TCTTATCT