Information for 6-GCAGTTAC (Motif 5)


Reverse Opposite:

p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.475
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif14.46%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets34.5 +/- 20.1bp
Average Position of motif in Background35.4 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ovo/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GCAGTTAC-
-CCGTTACA

ovo/MA0126.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCAGTTAC-
ACNGTTACT

prd/MA0239.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCAGTTAC-
ACNGTTACT

ovo/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCAGTTAC-
ACNGTTACT

AtMYB77(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCAGTTAC
AAGTGACAGTTAC

F3A4.140/MA0575.1/Jaspar

Match Rank:6
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GCAGTTAC
AAGTGACAGTTAC

ovo/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCAGTTAC
-CCGTTA-

ovo/dmmpmm(Down)/fly

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCAGTTAC----
-CCGTTACTTTT

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTAC
BRRCVGTTDN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTAC
GGCVGTTR-