Information for 10-ATCACTCC (Motif 8)


Reverse Opposite:

p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.623
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif8.88%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets37.9 +/- 20.0bp
Average Position of motif in Background36.5 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATCACTCC--
ATCACCCCAT

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATCACTCC--
ATCACCCCAT

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATCACTCC--
ATCACCCCAC

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATCACTCC-
-TCACACCT

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATCACTCC-
-TCACACCT

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATCACTCC-
-TCACACCT

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATCACTCC--
CNGTCACGCCAC

z/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATCACTCC-
ANTCACTCAA

z/MA0255.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATCACTCC-
ANTCACTCAA

ADR1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:ATCACTCC-
---ACCCCN