Information for 14-AAGGCCTTGA (Motif 10)


Reverse Opposite:

p-value:1e-13
log p-value:-3.189e+01
Information Content per bp:1.658
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets37.9 +/- 20.1bp
Average Position of motif in Background43.2 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AAGGCCTTGA
-AGGCCTNG-

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AAGGCCTTGA
-AGGCCTAG-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AAGGCCTTGA-
-TGACCTTGAN

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAGGCCTTGA-
-TGACCTTGAV

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCTTGA----
GCTGACCTTGAACTN

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGCCTTGA-
ATGACCTTGAA

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGGCCTTGA----
CAGGCCNNGGCCNN

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCTTGA
NATGACCTTGA

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AAGGCCTTGA---
NNNNATGACCTTGANTN

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGCCTTGA
ATGACCTTGA