Information for 15-GAAAGCAGCC (Motif 11)


Reverse Opposite:

p-value:1e-13
log p-value:-3.179e+01
Information Content per bp:1.702
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets37.3 +/- 19.5bp
Average Position of motif in Background37.8 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GAAAGCAGCC--
-----CAGCCAC

Dof2/MA0020.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAAAGCAGCC
-AAAGCA---

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GAAAGCAGCC--
----BCAGACWA

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAAGCAGCC
-ANTGCACCC

ERF094/MA1049.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAAAGCAGCC-
---CGCCGCCG

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAAAGCAGCC
----GCACCC

MNB1A/MA0053.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAAGCAGCC
-AAAGC----

SWI5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAAAGCAGCC
----CCAGCA

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GAAAGCAGCC
-----CAGCC

PBF/MA0064.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAAGCAGCC
-AAAGC----