Information for 10-GCTTGCCT (Motif 14)


Reverse Opposite:

p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.917
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets33.6 +/- 18.4bp
Average Position of motif in Background34.7 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCCT-
NNACTTGCCTT

SOK2(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCTTGCCT--
--TTGCCTGC

MOT3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCTTGCCT-
---TACCTN

MOT3(MacIsaac)/Yeast

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCTTGCCT-
---TACCTN

MOT3/MA0340.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCTTGCCT-
---TACCTN

GCR2(MacIsaac)/Yeast

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTTGCCT
GCTTCCN-

GCR2/MA0305.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTTGCCT
GCTTCCT-

NAC058/MA0938.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTTGCCT--
--TTGCGTGN

PHD1(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTTGCCT
--GTGCCT

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCCT
AAGCTTG---