Information for 11-CCCTGTGCARGC (Motif 15)


Reverse Opposite:

p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.746
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.5 +/- 14.8bp
Average Position of motif in Background55.0 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

LEC2/MA0581.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCCTGTGCARGC-
--ATGTGCATGNN

nub/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCCTGTGCARGC
--TTATGCAAGC

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCTGTGCARGC-
GGGCCGTGTGCAAAAA

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CCCTGTGCARGC-
-----TGCATGCA

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCTGTGCARGC-
---TTTGCATGGA

PHD1/MA0355.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCTGTGCARGC
--NGNTGCAGGN

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGTGCARGC
GTGCCGTGTGCAAA-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCTGTGCARGC
--CTGTTCCTGG

ABI3/MA0564.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCCTGTGCARGC--
-----TGCATGCAG

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCTGTGCARGC--
--CTGCGCATGCGC