Information for 24-GGGGCGTGGG (Motif 17)


Reverse Opposite:

p-value:1e-4
log p-value:-1.085e+01
Information Content per bp:1.856
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets36.8 +/- 16.5bp
Average Position of motif in Background29.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SP3/MA0746.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGTGGG
GGGGGCGTGGN

KLF16/MA0741.1/Jaspar

Match Rank:2
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGTGGG
GGGGGCGTGGC

SeqBias: polyC-repeat

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGGGCGTGGG
GGGGGGGGGG

SP8/MA0747.1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCGTGGG
AGTGGGCGTGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGTGGG---
NNAGGGGCGGGGTNNA

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GGGGCGTGGG
GGGGNGGGGC

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGTGGG
RGKGGGCGKGGC

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGGGCGTGGG
TGGGTGGGGC

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGTGGG-
AAGGGGGCGTGGCC

hkb/MA0450.1/Jaspar

Match Rank:10
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGGGCGTGGG
GGGGCGTGA-