Information for 25-CASAAATGAC (Motif 18)


Reverse Opposite:

p-value:1e-4
log p-value:-1.022e+01
Information Content per bp:1.758
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets39.7 +/- 17.3bp
Average Position of motif in Background36.0 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CASAAATGAC------
-AGAAATGACTTCCCT

sd/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CASAAATGAC
CCGAGGAATGTC

sd/MA0243.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CASAAATGAC
NCGANGAATGTC

pho/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CASAAATGAC
----AATGGC

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CASAAATGAC
AACATATGTC

CST6(MacIsaac)/Yeast

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CASAAATGAC
--NAAATGCA

twi/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CASAAATGAC
AACACATG--

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CASAAATGAC
RACAAWGG--

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CASAAATGAC
AACAAAGG--

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CASAAATGAC
AAAACAAAGG--