Information for 8-TAACCACA (Motif 4)


Reverse Opposite:

p-value:1e-24
log p-value:-5.755e+01
Information Content per bp:1.831
Number of Target Sequences with motif331.0
Percentage of Target Sequences with motif11.03%
Number of Background Sequences with motif93.7
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets36.6 +/- 20.2bp
Average Position of motif in Background39.1 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-TAACCACA-
NAAACCACAG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-TAACCACA---
NWAACCACADNN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TAACCACA--
AAACCACAGC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TAACCACA--
AAACCACANN

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TAACCACA---
AAACCACAGAN

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TAACCACA--
AAACCGCAAA

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TAACCACA-
AAACCGCAA

Bgb::run/MA0242.1/Jaspar

Match Rank:8
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TAACCACA-
TAACCGCAA

MET31(MacIsaac)/Yeast

Match Rank:9
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TAACCACA--
--GCCACACC

MET28/MA0332.1/Jaspar

Match Rank:10
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:TAACCACA-
---CCACAG