Information for 9-RTGASTCA (Motif 5)


Reverse Opposite:

p-value:1e-21
log p-value:-4.938e+01
Information Content per bp:1.851
Number of Target Sequences with motif232.0
Percentage of Target Sequences with motif7.73%
Number of Background Sequences with motif54.3
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets37.1 +/- 20.5bp
Average Position of motif in Background37.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:RTGASTCA--
ATGASTCATH

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCA---
NATGACTCATNN

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:3
Score:0.97
Offset:-2
Orientation:reverse strand
Alignment:--RTGASTCA--
NDATGASTCATH

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCA---
NATGASTCABNN

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RTGASTCA--
ATGACTCATC

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:6
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:RTGASTCA
-TGAGTCA

JUNB/MA0490.1/Jaspar

Match Rank:7
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--RTGASTCA-
GGATGACTCAT

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCA--
GGTGACTCATG

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RTGASTCA---
DATGASTCATNN

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--RTGASTCA-
GGATGACTCAT