Information for 9-GATTACAAAG (Motif 6)


Reverse Opposite:

p-value:1e-18
log p-value:-4.162e+01
Information Content per bp:1.756
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets37.3 +/- 20.8bp
Average Position of motif in Background20.1 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gsc/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GATTACAAAG
GGATTA-----

Gsc/MA0190.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GATTACAAAG
GGATTA-----

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GATTACAAAG
RGGATTAR----

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GATTACAAAG
CGGATTAN----

oc/MA0234.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GATTACAAAG
GGATTA-----

ap/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GATTACAAAG
NNATTA-----

slbo/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GATTACAAAG
-ATTGCAAA-

slbo/MA0244.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GATTACAAAG
-ATTGCAAA-

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GATTACAAAG
GNGGATTAGN---

Gsc/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GATTACAAAG
NGGATTAANN--