Information for 1-AGATDTTATC (Motif 1)


Reverse Opposite:

p-value:1e-96
log p-value:-2.218e+02
Information Content per bp:1.704
Number of Target Sequences with motif480.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif36.9
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets37.8 +/- 17.3bp
Average Position of motif in Background37.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---AGATDTTATC-------
NDBAGATRWTATCTVNNNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.93
Offset:-6
Orientation:forward strand
Alignment:------AGATDTTATC------
TTTTGTAGATTTTATCGACTTA

PH0014.1_Cphx/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--AGATDTTATC--
NTTGATTNNATCAN

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGATDTTATC
TGATGCAATC

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGATDTTATC-
---TCTTATCT

GLN3/MA0307.1/Jaspar

Match Rank:6
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:AGATDTTATC
-----TTATC

DUXA/MA0884.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGATDTTATC--
CTAATTTAATCAA

ARR1/MA0945.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGATDTTATC
NAGATTCGNT-

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGATDTTATC-
---YSTTATCT

GLN3(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGATDTTATC-
-TATCTTATCT