Information for 14-AGAGATGACA (Motif 13)


Reverse Opposite:

p-value:1e-13
log p-value:-3.010e+01
Information Content per bp:1.773
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets35.0 +/- 19.6bp
Average Position of motif in Background45.5 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0021.1_Gata3_1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----AGAGATGACA-------
TTTTTAGAGATAAGAAATAAAG

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGAGATGACA----
NCAGATAAGAANNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGAGATGACA
--AGATAASR

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATGACA
NNGAGATAAGA

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGAGATGACA-
ANAGATAAGAA

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGAGATGACA----
TATAGAGATAAGAATTG

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGAGATGACA
--AGATAAGA

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGAGATGACA
--AGATAAGA

TOD6?/SacCer-Promoters/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGAGATGACA-
-GCGATGAGMT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGAGATGACA
NBWGATAAGR