Information for 8-AGATBTCCCAGT (Motif 15)


Reverse Opposite:

p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.735
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets39.0 +/- 17.3bp
Average Position of motif in Background37.7 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SRD1/MA0389.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGATBTCCCAGT
GTAGATCT------

RLR1(MacIsaac)/Yeast

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGATBTCCCAGT-
ACAGTTCTTTCAGGA

ECM23/MA0293.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGATBTCCCAGT
NNNAGATCTNN----

dl/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATBTCCCAGT
GGGTTTTCCCNG-

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGATBTCCCAGT
AAGGCCAGATGGTCCGG-

GATA11/MA1014.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATBTCCCAGT
CAGATCTA-----

GAT3/MA0301.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGATBTCCCAGT
NNTAGATCT------

GAT4/MA0302.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGATBTCCCAGT
NNTAGATCTNN----

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGATBTCCCAGT
GACAGAGATATCAGTGT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGATBTCCCAGT
--HTTTCCCASG