Information for 13-TGAGTCAT (Motif 16)


Reverse Opposite:

p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.889
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets32.0 +/- 20.2bp
Average Position of motif in Background34.8 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCN4(MacIsaac)/Yeast

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGAGTCAT
TGAGTCAT

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTCAT
ATGAGTCAT

FOS/MA0476.1/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TGAGTCAT-
TGTGACTCATT

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTCAT--
NTGAGTCATCN

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTCAT
GATGAGTCAT

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTCAT--
ATGAGTCATCN

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--TGAGTCAT
DATGASTCAT

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---TGAGTCAT-
NNATGAGTCATN

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:9
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---TGAGTCAT-
NDATGASTCATH

BATF::JUN/MA0462.1/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TGAGTCAT---
TGAGTCATTTC