Information for 22-GGAGGYTGGC (Motif 17)


Reverse Opposite:

p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.632
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets33.9 +/- 20.2bp
Average Position of motif in Background41.9 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGYTGGC-----
NGTAGGTTGGCATNNN

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGAGGYTGGC--
---GGTTGGCAT

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GGAGGYTGGC---
----NTTGGCANN

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGAGGYTGGC-
-----TTGGCA

ACE2/MA0267.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAGGYTGGC
---TGCTGGT

SWI5(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGAGGYTGGC-
---TGCTGGTT

CRZ1(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGAGGYTGGC
-GAGGCTG--

SWI5/Literature(Harbison)/Yeast

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGAGGYTGGC
---GGCTGA-

SWI5/MA0402.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGAGGYTGGC-
---TGCTGGTT

gcm2/MA0917.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGAGGYTGGC
--ATGCGGGT