Information for 23-GCTAGAAGCT (Motif 18)


Reverse Opposite:

p-value:1e-7
log p-value:-1.722e+01
Information Content per bp:1.710
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets35.5 +/- 18.3bp
Average Position of motif in Background27.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTAGAAGCT
-CTCGAAG--

ABF2/MA0266.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTAGAAGCT
CTCTAGA----

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTAGAAGCT
---NGAAGC-

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCTAGAAGCT--
NGNTCTAGAACCNGV

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGAAGCT---
NNGATCTAGAACCTNNN

SFL1(MacIsaac)/Yeast

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCTAGAAGCT--
----GAAGCTTC

GCR1/MA0304.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTAGAAGCT
--TGGAAGCC

GCR2(MacIsaac)/Yeast

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTAGAAGCT
--NGGAAGC-

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTAGAAGCT----
TTCTAGAABNTTCTA

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTAGAAGCT--
TTCTAGAACGTTC