Information for 24-CTATAAAATC (Motif 19)


Reverse Opposite:

p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.530
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.4 +/- 21.4bp
Average Position of motif in Background41.7 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-box/Drosophila-Promoters/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CTATAAAATC--
CTATAAAAGCSV

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTATAAAATC
GNCTATAAAAGG

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTATAAAATC-----
GTATAAAAGGCGGGG

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTATAAAATC-----
GTATAAAAGGCGGGG

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTATAAAATC--
CTACCAATAAAATTCT

TBP(- other)/several species/AthaMap

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTATAAAATC-
ACTATAAATACC

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTATAAAATC
NGCAATTAAA--

croc/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTATAAAATC
--ATAAAA--

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTATAAAATC
NNTGTTAAAA-

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTATAAAATC
NCYAATAAAA--