Information for 2-TGTTTRCTYW (Motif 2)


Reverse Opposite:

p-value:1e-83
log p-value:-1.916e+02
Information Content per bp:1.606
Number of Target Sequences with motif1069.0
Percentage of Target Sequences with motif35.63%
Number of Background Sequences with motif365.9
Percentage of Background Sequences with motif13.67%
Average Position of motif in Targets36.8 +/- 19.1bp
Average Position of motif in Background37.2 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:TGTTTRCTYW
TRTTTACTTW

pha-4/MA0546.1/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCTYW
TGTTTACTTT

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCTYW
TGTTTACTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCTYW
TGTTTACTTT

fkh/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCTYW-
TGTTTGCNTAA

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----TGTTTRCTYW-
TCCATGTTTACTTTG

fkh/MA0446.1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TGTTTRCTYW-
TGTTTGCTTAA

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TGTTTRCTYW--
TGTTTACTTAGG

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCTYW
TGTTTAC---

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCTYW-----
NSTGTTTRCWCAGBNNN