Information for 10-ATCTYTCTATCT (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.861
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets24.3 +/- 17.2bp
Average Position of motif in Background38.3 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: GA-repeat

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATCTYTCTATCT
-TCTCTCTCTC-

GAGA-repeat/SacCer-Promoters/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--ATCTYTCTATCT-
CTYTCTYTCTCTCTC

Trl/dmmpmm(Down)/fly

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:ATCTYTCTATCT-
-GCTCTCTCTCTC

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATCTYTCTATCT-
TTGCTCTCTCTCTC

eor-1/MA0543.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATCTYTCTATCT--
TCTCTGCGTCTCTNN

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATCTYTCTATCT
--CTCTCTCTCY

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATCTYTCTATCT
CTTATCTCHMCATCT

Trl/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATCTYTCTATCT
TTNCTCTCTCTCT

AGL27/MA1012.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATCTYTCTATCT----
-ACTTTCTATTTTTGG

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCTYTCTATCT
CTCTCTCY----