Information for 25-ATGTTGACTT (Motif 23)


Reverse Opposite:

p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.700
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets32.4 +/- 21.1bp
Average Position of motif in Background30.4 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:ATGTTGACTT--
---TTGACTTTT

WRKY43/MA1086.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ATGTTGACTT
NNGTTGACTN

tll/MA0459.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ATGTTGACTT--
--TTTGACTTTT

WRKY57/MA1089.1/Jaspar

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATGTTGACTT-
-NGTTGACTTN

tll/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATGTTGACTT-----
NNTTTGACTTTTNGT

WRKY75/MA1093.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ATGTTGACTT
--GTTGACTN

ASH1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ATGTTGACTT
---CTGACT-

WRKY23/MA1080.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATGTTGACTT
-CGTTGACT-

tll/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ATGTTGACTT-
---TTGACTTT

WRKY21/MA1079.1/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATGTTGACTT-
-CGTTGACCNN