Information for 11-TGTGTGTGTKTD (Motif 24)


Reverse Opposite:

p-value:1e-3
log p-value:-8.095e+00
Information Content per bp:1.668
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif3.50%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets34.1 +/- 20.6bp
Average Position of motif in Background46.6 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTGTKTD
TGTGTGTGTG--

daf-12/MA0538.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGTGTGTGTKTD
GTGTGTGTGTGCGTG

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGTGTGTGTKTD
-KTGTTTGC---

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTGTKTD
ANTCCTTTGTCTNNNN-

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTGTGTKTD
NNNNTTTGTTTACNNT

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTGTKTD
NNNNTTGTGTGCTTNN-

MET31(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTGTGTGTKTD
GGTGTGGC----

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGTGTKTD
NNGCGTGTGTGCNGCN-

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGTGTKTD--
CTTTGTTTACTTTTN

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGTGTGTGTKTD
--TGTTTATTT-