Information for 5-SCCYBAGG (Motif 6)


Reverse Opposite:

p-value:1e-32
log p-value:-7.534e+01
Information Content per bp:1.606
Number of Target Sequences with motif891.0
Percentage of Target Sequences with motif29.70%
Number of Background Sequences with motif436.3
Percentage of Background Sequences with motif16.30%
Average Position of motif in Targets37.2 +/- 19.6bp
Average Position of motif in Background37.6 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:SCCYBAGG----
SCCTSAGGSCAW

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---SCCYBAGG----
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---SCCYBAGG----
ATTCCCTGAGGGGAA

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-SCCYBAGG--
CGCCTCAGGCA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---SCCYBAGG----
ATTGCCTGAGGCAAT

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:SCCYBAGG----
GCCTCAGGGCAT

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-SCCYBAGG--
AGCCTCAGGCA

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-SCCYBAGG--
AGCCTCAGGCA

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--SCCYBAGG----
TTGCCCTAGGGCAT

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-SCCYBAGG---
TGCCCCAGGGCA