Information for 4-GHCARACMWGTT (Motif 8)


Reverse Opposite:

p-value:1e-22
log p-value:-5.106e+01
Information Content per bp:1.574
Number of Target Sequences with motif370.0
Percentage of Target Sequences with motif12.33%
Number of Background Sequences with motif135.9
Percentage of Background Sequences with motif5.08%
Average Position of motif in Targets37.4 +/- 18.1bp
Average Position of motif in Background37.3 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:GHCARACMWGTT-
---AAACCGGTTT

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GHCARACMWGTT--
--AAAACCGGTTTT

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------GHCARACMWGTT-
VAAACYKGTHWAACMRGTTT

grh/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GHCARACMWGTT--
CCGCAAAACCAGTTNA

grh/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GHCARACMWGTT
----AACCAG--

grh/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GHCARACMWGTT
---AAACCAG--

grh/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GHCARACMWGTT
ANAAAACCAG--

YML081W(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GHCARACMWGTT
TTCAGACTGG--

br-Z3/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GHCARACMWGTT
--AAAACAAAA-

br-Z3/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GHCARACMWGTT-
-----ACTAGTTT