Information for 1-ATGTTTRY (Motif 1)


Reverse Opposite:

p-value:1e-52
log p-value:-1.201e+02
Information Content per bp:1.779
Number of Target Sequences with motif474.0
Percentage of Target Sequences with motif50.75%
Number of Background Sequences with motif129.3
Percentage of Background Sequences with motif16.34%
Average Position of motif in Targets34.9 +/- 20.4bp
Average Position of motif in Background38.8 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:ATGTTTRY
KTGTTTGC

FOXD2/MA0847.1/Jaspar

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:ATGTTTRY
-TGTTTAC

FOXL1/MA0033.2/Jaspar

Match Rank:3
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:ATGTTTRY
-TGTTTAC

FOXP3/MA0850.1/Jaspar

Match Rank:4
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:ATGTTTRY
-TGTTTAC

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.91
Offset:1
Orientation:forward strand
Alignment:ATGTTTRY--
-TGTTTATTT

fkh/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:ATGTTTRY----
-TGTTTGCNTAA

FOXO4/MA0848.1/Jaspar

Match Rank:7
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:ATGTTTRY
-TGTTTAC

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATGTTTRY
TTGTTTAC

fkh/MA0446.1/Jaspar

Match Rank:9
Score:0.87
Offset:1
Orientation:forward strand
Alignment:ATGTTTRY----
-TGTTTGCTTAA

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ATGTTTRY
-TGTTTAC