Information for 9-AATGCTGTGT (Motif 11)


Reverse Opposite:

p-value:1e-6
log p-value:-1.424e+01
Information Content per bp:1.821
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets34.8 +/- 21.5bp
Average Position of motif in Background34.4 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AATGCTGTGT--
NNTCCTGCTGTGNNN

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AATGCTGTGT---
AAANTGCTGACTNAG

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----AATGCTGTGT----
NAAAANTGCTGACTCAGC

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AATGCTGTGT--
TNTCCTGCTGTGNNG

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AATGCTGTGT--
TCNCCTGCTGNGNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AATGCTGTGT
---GCTGTG-

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATGCTGTGT---
-HTGCTGAGTCAT

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATGCTGTGT---
AWWNTGCTGAGTCAT

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AATGCTGTGT--
AAAWWTGCTGACWWD

mab-3/MA0262.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AATGCTGTGT---
AATGTTGCGAATT