Information for 2-NGGAATGN (Motif 2)


Reverse Opposite:

p-value:1e-26
log p-value:-6.133e+01
Information Content per bp:1.394
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif10.92%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets36.0 +/- 19.9bp
Average Position of motif in Background57.7 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD3/MA0808.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:NGGAATGN
TGGAATGT

TEC1/MA0406.1/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:NGGAATGN
GGGAATGT

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:NGGAATGN
AGGAATG-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--NGGAATGN
CCWGGAATGY

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-NGGAATGN-
NTGGAATGTG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--NGGAATGN
NCTGGAATGC

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-NGGAATGN-
NTGGAATGTN

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--NGGAATGN
CCWGGAATGY

TEC1(MacIsaac)/Yeast

Match Rank:9
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:NGGAATGN-
-AGAATGTG

Ik-1

Match Rank:10
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----NGGAATGN-
ACTTGGGAATACC