Information for 7-GGGCSGCG (Motif 5)


Reverse Opposite:

p-value:1e-16
log p-value:-3.874e+01
Information Content per bp:1.651
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.17%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets33.1 +/- 20.1bp
Average Position of motif in Background40.0 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRF2/MA0975.1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGG

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG
-GGCGGCG

CRF4/MA0976.1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGC

RAP2-6/MA1052.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGC

ERF094/MA1049.1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGGCSGCG
CGGCGGCG

ERF109/MA1053.1/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGC

ERF4/MA0992.1/Jaspar

Match Rank:7
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGG

RAP2-3/MA1051.1/Jaspar

Match Rank:8
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGC

STP1(MacIsaac)/Yeast

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGGCSGCG
GCGCCGCA

RAP2-10/MA0980.1/Jaspar

Match Rank:10
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGGCSGCG-
-GGCGGCGC