Information for 8-AGTCATCG (Motif 6)


Reverse Opposite:

p-value:1e-13
log p-value:-3.196e+01
Information Content per bp:1.610
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif16.60%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif5.25%
Average Position of motif in Targets39.0 +/- 19.9bp
Average Position of motif in Background35.8 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:AGTCATCG
-GTCATN-

GCN4(MacIsaac)/Yeast

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATCG
TGAGTCAT--

ASH1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AGTCATCG
AGTCAA--

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATCG
GAGTCA---

WRKY23/MA1080.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AGTCATCG
AGTCAACG

RTG3(MacIsaac)/Yeast

Match Rank:6
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATCG
TGAGTCAT--

ARG81(MacIsaac)/Yeast

Match Rank:7
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATCG
NGAGTCAC--

ARG81/MA0272.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATCG
NGAGTCAC--

WRKY21/MA1079.1/Jaspar

Match Rank:9
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AGTCATCG
AAGGTCAACG

WRKY48/MA1088.1/Jaspar

Match Rank:10
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AGTCATCG
GAGGTCAACG