Information for 10-AGCGCGGG (Motif 9)


Reverse Opposite:

p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.470
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets41.1 +/- 19.6bp
Average Position of motif in Background40.7 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SUT1?/SacCer-Promoters/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AGCGCGGG-
-GCGCGGGG

SUT1(MacIsaac)/Yeast

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGCGCGGG-
--CGCGGGG

FHY3/MA0557.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGCGCGGG--
NNAGCGCGTGNN

SUT1/MA0399.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGCGCGGG-
--CGCGGGG

RSC30/MA0375.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGCGCGGG
CGCGCGCG

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGCGCGGG---
-GGGCGGGACC

PUT3/MA0358.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGCGCGGG--
--CCCGGGAA

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGCGCGGG----
-GGGCGGGAAGG

UGA3/MA0410.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCGCGGG-
-CGGCGGGA

RSC3/MA0374.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCGGG
NNGCGCG--