Information for 10-AGCAATCT (Motif 11)


Reverse Opposite:

p-value:1e-13
log p-value:-3.103e+01
Information Content per bp:1.868
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets38.3 +/- 20.8bp
Average Position of motif in Background29.6 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CBF(- other)/several species/AthaMap

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGCAATCT--
AATTCCAATTATA

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGCAATCT-
-CCAATCAA

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCAATCT---
-CAAATCACTG

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCAATCT
NAACAAT--

slbo/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGCAATCT
TTNNACAATA-

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCAATCT--
CCATCAATCAAA

ATHB-7/MA0954.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCAATCT---
-TCAATCATTG

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCAATCT
AACAAT--

bcd-1/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGCAATCT
-CTAATCT

bcd-1/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGCAATCT
-CTAATCT