Information for 11-CGCGGGGC (Motif 12)


Reverse Opposite:

p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.610
Number of Target Sequences with motif300.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif130.1
Percentage of Background Sequences with motif4.81%
Average Position of motif in Targets35.6 +/- 20.3bp
Average Position of motif in Background36.7 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SUT1(MacIsaac)/Yeast

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CGCGGGGC
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CGCGGGGC
CGCGGGG-

SUT1?/SacCer-Promoters/Homer

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGGGC
GCGCGGGG-

MIG2/MA0338.1/Jaspar

Match Rank:4
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:CGCGGGGC
NGCGGGG-

MIG3/MA0339.1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CGCGGGGC
TGCGGGG-

MIG1/MA0337.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CGCGGGGC
-GCGGGGN

YGR067C/MA0425.1/Jaspar

Match Rank:7
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------CGCGGGGC
NNNNNNNGTGGGGN

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CGCGGGGC-
GGGGGCGGGGCC

ZMS1/MA0441.1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCGGGGC-
TGCGGGGAA

TDA9/MA0431.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGGGC
NTGNGGGGN