Information for 12-TAAACGCA (Motif 13)


Reverse Opposite:

p-value:1e-13
log p-value:-3.046e+01
Information Content per bp:1.605
Number of Target Sequences with motif177.0
Percentage of Target Sequences with motif5.90%
Number of Background Sequences with motif56.1
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets36.6 +/- 20.4bp
Average Position of motif in Background39.7 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CST6(MacIsaac)/Yeast

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TAAACGCA
NAAATGCA

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAAACGCA
GCTAAACGGT

Bgb::run/MA0242.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAAACGCA-
TAACCGCAA

FHL1/MA0295.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TAAACGCA--
--GACGCAAA

B-H1/MA0168.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAAACGCA
TTAATTG--

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAAACGCA-
AAACCGCAA

NAC080/MA0939.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAAACGCA-
-ACACGCAA

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAACGCA
GCTAATTGCT

RME1/MA0370.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAACGCA
TCCAAAGGAA

RME1(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAACGCA
TCCAAAGGAA