Information for 16-HTGATCTAGV (Motif 16)


Reverse Opposite:

p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.471
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets36.8 +/- 20.0bp
Average Position of motif in Background54.9 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ABF2/MA0266.1/Jaspar

Match Rank:1
Score:0.78
Offset:4
Orientation:reverse strand
Alignment:HTGATCTAGV-
----TCTAGAN

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--HTGATCTAGV---
BCNGGTTCTAGANCN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:HTGATCTAGV-------
NNGATCTAGAACCTNNN

GATA9/MA1018.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-HTGATCTAGV
NCAGATCTAGN

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-HTGATCTAGV
TCAGATCTAC-

GAT3/MA0301.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:HTGATCTAGV
-AGATCTACA

GATA10/MA1013.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:HTGATCTAGV
CAGATCTA--

GATA11/MA1014.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:HTGATCTAGV
CAGATCTA--

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---HTGATCTAGV----
GANGTTAACTAGTTTNN

GAT4/MA0302.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-HTGATCTAGV
AAAGATCTAAA