Information for 17-CAAGTCAGAY (Motif 17)


Reverse Opposite:

p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.499
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets39.5 +/- 19.6bp
Average Position of motif in Background43.0 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NAC92/MA1044.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CAAGTCAGAY
TAACACGCCACA-

ASH1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CAAGTCAGAY
--AGTCAA--

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCAGAY
AAAAGTCAA--

tll/MA0459.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCAGAY
AAAAGTCAAA-

tll/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CAAGTCAGAY-
ACNAAAAGTCAAANN

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CAAGTCAGAY-
-ATGCCAGACN

tll/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CAAGTCAGAY
AAAGTCAAA-

WRKY43/MA1086.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAAGTCAGAY-
-AAGTCAACAC

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAAGTCAGAY
AAGGTCAC--

tll/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAAGTCAGAY
AAAGTCA---