Information for 17-TGGCTTTG (Motif 18)


Reverse Opposite:

p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.856
Number of Target Sequences with motif132.0
Percentage of Target Sequences with motif4.40%
Number of Background Sequences with motif43.0
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets40.8 +/- 18.4bp
Average Position of motif in Background39.7 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1/MA0285.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTTG
GTGGCTNNG

Dof2/MA0020.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGGCTTTG
-NGCTTT-

MNB1A/MA0053.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGGCTTTG
--GCTTT-

PBF/MA0064.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TGGCTTTG
--GCTTT-

Dof3/MA0021.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGGCTTTG
-CGCTTT-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGGCTTTG--
TGACCTTGAN

pan/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGGCTTTG--
---CTTTGAT

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGCTTTG--
TGACCTTGAV

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGCTTTG---
NNGCTTTANNN

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTTTG-----
GCTGACCTTGAACTN