Information for 21-ATCTTWGCCT (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.581
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets40.3 +/- 20.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MNB1A/MA0053.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATCTTWGCCT
-GCTTT----

Dof2/MA0020.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATCTTWGCCT
NGCTTT----

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTWGCCT
GCGGATCTTANC--

PBF/MA0064.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATCTTWGCCT
-GCTTT----

ARR2/MA0949.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATCTTWGCCT
GCGAATCTTT----

GLN3/GLN3_RAPA/8-GZF3,11-GLN3(Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTWGCCT
TATCTTATC--

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATCTTWGCCT---
-ACTTTCACTTTC

RIM101/MA0368.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATCTTWGCCT
--CTTGGCG-

DAL82/DAL82_SM/3-DAL82(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCTTWGCCT
-TCTTATC--

RIM101/Literature(Harbison)/Yeast

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCTTWGCCT
--CTTGGCA-