Information for 2-TCAGATAA (Motif 2)


Reverse Opposite:

p-value:1e-97
log p-value:-2.242e+02
Information Content per bp:1.810
Number of Target Sequences with motif965.0
Percentage of Target Sequences with motif32.17%
Number of Background Sequences with motif266.6
Percentage of Background Sequences with motif9.87%
Average Position of motif in Targets38.1 +/- 20.7bp
Average Position of motif in Background38.2 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.88
Offset:2
Orientation:forward strand
Alignment:TCAGATAA--
--AGATAASR

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TCAGATAA---
-CAGATAAGGN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TCAGATAA---
-NAGATAAGNN

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.87
Offset:2
Orientation:forward strand
Alignment:TCAGATAA--
--AGATAAGA

GATA2/MA0036.2/Jaspar

Match Rank:5
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TCAGATAA------
NCAGATAAGAANNN

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TCAGATAA--
NNGAGATAAGA

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.85
Offset:2
Orientation:forward strand
Alignment:TCAGATAA--
--AGATAAGA

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TCAGATAA--
NBWGATAAGR

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TCAGATAA---
ANAGATAAGAA

DAL80/Literature(Harbison)/Yeast

Match Rank:10
Score:0.84
Offset:3
Orientation:forward strand
Alignment:TCAGATAA
---GATAA