Information for 22-NGTATCTTGN (Motif 20)


Reverse Opposite:

p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.392
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets35.0 +/- 20.7bp
Average Position of motif in Background42.0 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR2/MA0949.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-NGTATCTTGN
GCGAATCTTT-

ARR18/MA0948.1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--NGTATCTTGN-
NNCGTATCTNNNN

ARR11/MA0946.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:NGTATCTTGN
CGTATCTT--

ARR1/MA0945.1/Jaspar

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--NGTATCTTGN
AGCGAATCTT--

LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---NGTATCTTGN
ADAAATATCT---

ARR14/MA0947.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-NGTATCTTGN
GCGTATCT---

ARR10/MA0121.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-NGTATCTTGN
GCGGATCT---

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-NGTATCTTGN---
TNTTATCTTATCTT

ARR10(GARP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-NGTATCTTGN-
GCGGATCTTANC

NAC92/MA1044.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:NGTATCTTGN--
NNTGGCGTGTNN