Information for 24-GCGCGCCCAG (Motif 21)


Reverse Opposite:

p-value:1e-7
log p-value:-1.664e+01
Information Content per bp:1.663
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets38.5 +/- 21.0bp
Average Position of motif in Background46.7 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCCAG
AGCGCGCC---

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCCAG--
ANCGCGCGCCCTTNN

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCCAG--
NTCGCGCGCCTTNNN

RSC30/MA0375.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCCAG
CGCGCGCG---

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCGCGCCCAG
TAGCGCGC----

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCGCGCCCAG---
---TGCCCAGNHW

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGCCCAG
NCANGCGCGCGCGCCA

RSC3/MA0374.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCGCGCCCAG
-CGCGCGG--

SeqBias: CG-repeat

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCCAG
CGCGCGCGCG-

SKN7/SKN7_H2O2Lo/[](Harbison)/Yeast

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCCAG
GCCNGGGCC--