Information for 4-AGGAATGC (Motif 4)


Reverse Opposite:

p-value:1e-49
log p-value:-1.138e+02
Information Content per bp:1.819
Number of Target Sequences with motif470.0
Percentage of Target Sequences with motif15.67%
Number of Background Sequences with motif112.0
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets37.7 +/- 20.0bp
Average Position of motif in Background36.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD3/MA0808.1/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:AGGAATGC
TGGAATGT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGC
CCWGGAATGY

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AGGAATGC
AGGAATG-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGC
NCTGGAATGC

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-AGGAATGC-
NTGGAATGTG

TEC1/MA0406.1/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AGGAATGC
GGGAATGT

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-AGGAATGC-
NTGGAATGTN

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGC
CCWGGAATGY

TEC1(MacIsaac)/Yeast

Match Rank:9
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AGGAATGC-
-AGAATGTG

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGAATGC
AGAGGAA---